THE PROBLEM
Designing effective new drugs is a difficult, complicated and expensive
task. Identifying compounds that are active against various diseases
and then understanding their mechanism of activity and how they
cure diseases are enormous undertakings that requires years of research.
Because of the incredible complexity and delicate internal chemical
balances in the body, it takes trained experts and intense, careful
study to ensure the safety of these medicines.
Over the last decade a powerful imaging technique called magnetic
resonance imaging (MRI) has emerged as an important medical diagnostic
tool, especially for tissues that are otherwise impossible to study,
such as those deep within the brain. MRI exploits the fact that
different tissues behave differently in strong magnetic fields.
With computerized imaging technology, researchers can observe this
behavior in the body's tissues under different conditions, without
surgery or lengthy hospital stays.
Dr. Ron Behling, a researcher at Bristol-Myers Squibb's Pharmaceutical
Research Institute in New Jersey, is using Visual Numerics' PV-WAVE
visual data analysis software and MRI to study problems in drug
discovery and design. Dr. Behling uses MRI to measure the effects
of drug activity and to understand how drugs work within the body.
One disadvantage of MRI is that a large amount of data is created.
One experiment can easily produce more than four gigabytes of data,
and there are often multiple experiments in a study. To interpret
these images, Dr. Behling needs powerful analysis and imaging techniques
that can handle this volume of data and still remain interactive.
THE SOLUTION
In Dr. Behling's work, MRI data are sent to his Silicon Graphics®
workstation where they are read into PV-WAVE. According to Dr. Behling,
"Although there are no standard data formats in MRI, it is
trivial for me to read my data into PV-WAVE since the command language
has the flexibility to read virtually any data." In a few commands,
the image is quickly displayed. A fast visual inspection determines
if the data are suitable for further study.
In further analysis, Dr. Behling uses many of PV-WAVE's graphics
and analysis features. For example, color tables are interactively
manipulated to bring out hidden details in the images. Regions of
interest are selected for more detailed statistical analysis. Using
various PV-WAVE analysis functions, like FFTs and curve fits, custom
procedures are developed to assess diffusion rate constants in the
tissues. Contour plots provide a closer look at relative scales
and intensities in the images. And finally, binary files and hard-copy
output to TIFF and Postscript formats help to share findings with
colleagues and professional publications.
Flexibility is important in Dr. Behling's work because an analysis
or visualization technique appropriate for one type of data may
be completely unsuitable for another. PV-WAVE, with its highly interactive
command-based interface and its powerful macro capability, provides
the flexibility to easily modify existing analysis methods and add
new algorithms. This is absolutely vital for successful data analysis.
Reports Dr. Behling, "While many packages provide imaging capability,
the flexibility to analyze the images in any way is a special strength
of PV-WAVE. I process the data as I wish, visualize them quickly,
search for interesting regions, analyze those regions and do further
analysis based on those results. Because of the ease of visualization
and analysis, I can analyze data quickly and do analyses that would
otherwise be quite difficult to perform."
RETURN ON INVESTMENT
With MRI and PV-WAVE, Dr. Behling and his colleagues have the tools
they need to study the behavior of drugs and thereby design medicines
that are safer and more effective for future patients.
WORLD CLASS PRODUCTS, SERVICES,
AND SUPPORT
Visual Numerics has provided technical software
solutions for numerical analysis and visualization for over 30 years.
The company's software products help users understand complex data
from a variety of sources and build business-critical applications.
Visual Numerics offers two product lines: the IMSL® Numerical
Libraries for powerful mathematical and statistical analysis and
the PV-WAVE® visual data analysis development environment. Visual
Numerics also offers customized consulting services for applications
that involve mathematical, statistical, or visual data analysis
to meet today’s business analytical needs.